Alistipes sp. AF48-12

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AF48-12 is a Gram-negative bacterium notable for its possession of flagella, which suggests it has motility capabilities. This characteristic may influence its ecological interactions and ability to colonize specific niches within its environment. The organism is characterized by having a single replicon, indicating a streamlined genetic structure that could be reflective of its adaptation strategies or evolutionary history. The accession number associated with Alistipes sp. AF48-12 is QUDJ00000000.1, which serves as a reference for its genomic data. This unique identifier allows for tracking and studying the bacterium's genetic makeup in various biological and ecological contexts. In summary, Alistipes sp. AF48-12 represents a motile, Gram-negative bacterium with a simple genomic architecture. Its traits suggest potential ecological roles that may include interactions with other microorganisms and contributions to nutrient cycling in its habitat. Understanding its biology further may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AF48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AF48-12 AF48-12.Scaf58, whole genome shotgun

Gene Summary

Adenine Count

738885 bp

Thymine Count

711408 bp

Guanine Count

846764 bp

Cytosine Count

866596 bp

Genome Length

3164445 bp

Protein-coding Genes

2493 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hlyc/corc family transporterDW082_12445Not AvailablePositive2816963 - 281822247302.5
hypothetical proteinDW082_12450Not AvailablePositive2818370 - 282043075294.8
s9 family peptidaseDW082_12455Not AvailableNegative2820544 - 282269480210.0
nudix domain-containing proteinDW082_12460Not AvailableNegative2822722 - 282333623681.5
orotate phosphoribosyltransferaseDW082_12465Not AvailablePositive2823344 - 282397623223.8
polyketide cyclaseDW082_12470Not AvailablePositive2823988 - 282439815458.9
antibiotic biosynthesis monooxygenaseDW082_12475Not AvailablePositive2824432 - 282472210859.0
methyltransferase domain-containing proteinDW082_12480Not AvailableNegative2824808 - 282557229949.2
exodeoxyribonuclease vii small subunitDW082_12485Not AvailableNegative2825577 - 28257747607.09
exodeoxyribonuclease vii large subunitDW082_12490Not AvailableNegative2825864 - 282715047205.9

Displaying genes 2231 – 2240 of 2543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.