Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | DW082_12230 | Not Available | Negative | 2765292 - 2766815 | 55804.7 |
| alanine--trna ligase | DW082_12235 | Not Available | Negative | 2766862 - 2769483 | 98493.2 |
| m23 family peptidase | DW082_12240 | Not Available | Positive | 2769657 - 2770625 | 36963.8 |
| m23 family peptidase | DW082_12245 | Not Available | Positive | 2770630 - 2771601 | 37825.1 |
| pyridoxal phosphate-dependent aminotransferase family protein | DW082_12255 | Not Available | Negative | 2774093 - 2775343 | 46547.5 |
| outer membrane protein assembly factor bamd | DW082_12260 | Not Available | Positive | 2775941 - 2776765 | 31980.9 |
| rna polymerase rpb6 | DW082_12265 | Not Available | Positive | 2776746 - 2777090 | 12988.2 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DW082_12270 | Not Available | Positive | 2777121 - 2778335 | 43389.2 |
| dna repair protein recn | DW082_12275 | Not Available | Positive | 2778388 - 2780055 | 61651.4 |
| 2-isopropylmalate synthase | DW082_12280 | Not Available | Positive | 2780263 - 2781777 | 54731.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
