Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW082_11510 | Not Available | Negative | 2608013 - 2608822 | 28331.9 |
| tonb-dependent receptor | DW082_11515 | Not Available | Negative | 2608840 - 2611320 | 93441.0 |
| gatb/yqey domain-containing protein | DW082_11520 | Not Available | Negative | 2611590 - 2612036 | 15710.3 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DW082_11525 | Not Available | Negative | 2612093 - 2614057 | 72763.2 |
| atp-binding cassette domain-containing protein | DW082_11530 | Not Available | Negative | 2614200 - 2614940 | 27595.7 |
| Tmrna,resume consensus sequence (at 88): tacaaatggcgataatag | Not Available | Not Available | Positive | 2615179 - 2615576 | Not Available |
| ytxh domain-containing protein | DW082_11545 | Not Available | Positive | 2617225 - 2617608 | 14862.7 |
| response regulator | DW082_11550 | Not Available | Negative | 2617805 - 2619703 | 71862.1 |
| endonuclease muts2 | DW082_11555 | Not Available | Negative | 2619901 - 2622393 | 93249.9 |
| mce family protein | DW082_11560 | Not Available | Negative | 2622431 - 2623381 | 35069.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
