Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW082_09980 | Not Available | Negative | 2283433 - 2285874 | 90303.8 |
| dna lyase | DW082_09985 | Not Available | Positive | 2285925 - 2286356 | 16637.3 |
| tigr01777 family protein | DW082_09990 | Not Available | Positive | 2286353 - 2287216 | 30462.0 |
| histone h1 | DW082_09995 | Not Available | Negative | 2287308 - 2287484 | 6588.07 |
| site-specific integrase | DW082_10000 | Not Available | Positive | 2288113 - 2289336 | 46046.4 |
| site-specific integrase | DW082_10005 | Not Available | Positive | 2289368 - 2290657 | 50538.9 |
| protein-tyrosine kinase | DW082_10010 | Not Available | Positive | 2290686 - 2291005 | 12370.0 |
| dna-binding protein | DW082_10015 | Not Available | Negative | 2291363 - 2291508 | 5550.55 |
| dna-binding protein | DW082_10020 | Not Available | Negative | 2291505 - 2291810 | 11647.1 |
| hypothetical protein | DW082_10025 | Not Available | Positive | 2291875 - 2292363 | 17852.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
