Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DW082_00855 | Not Available | Positive | 187875 - 189128 | 47196.2 |
| duf1080 domain-containing protein | DW082_00860 | Not Available | Positive | 189156 - 192575 | 122081.0 |
| ssra-binding protein smpb | DW082_00865 | Not Available | Negative | 192679 - 193134 | 17724.6 |
| duf4290 domain-containing protein | DW082_00870 | Not Available | Negative | 193141 - 193830 | 26451.5 |
| sigma-54-dependent fis family transcriptional regulator | DW082_00875 | Not Available | Positive | 194102 - 195313 | 44423.1 |
| acylhydrolase | DW082_00880 | Not Available | Positive | 195614 - 196198 | 21561.1 |
| n-acetyltransferase | DW082_00885 | Not Available | Positive | 196221 - 196769 | 21245.6 |
| glutamate--trna ligase | DW082_00890 | Not Available | Positive | 197024 - 198553 | 57345.3 |
| hypothetical protein | DW082_00895 | Not Available | Positive | 198744 - 200057 | 48212.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DW082_00900 | Not Available | Negative | 200105 - 200578 | 18208.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
