Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | DW082_08600 | Not Available | Negative | 1965497 - 1966978 | 57573.8 |
| putative c-s lyase | DW082_08605 | Not Available | Positive | 1967115 - 1968320 | 45818.8 |
| hepn domain-containing protein | DW082_08610 | Not Available | Negative | 1968380 - 1969273 | 35309.2 |
| is982 family transposase | DW082_08615 | Not Available | Positive | 1969910 - 1970004 | 3390.28 |
| gnat family n-acetyltransferase | DW082_08620 | Not Available | Negative | 1970479 - 1971336 | 32371.6 |
| nuclear transport factor 2 family protein | DW082_08625 | Not Available | Negative | 1971348 - 1971725 | 14256.0 |
| duf418 domain-containing protein | DW082_08630 | Not Available | Positive | 1971814 - 1972122 | 11933.8 |
| dna methylase | DW082_08635 | Not Available | Negative | 1972309 - 1978149 | 220158.0 |
| duf1896 domain-containing protein | DW082_08640 | Not Available | Negative | 1978139 - 1978591 | 17341.2 |
| duf4099 domain-containing protein | DW082_08650 | Not Available | Negative | 1980904 - 1982481 | 60048.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
