Alistipes sp. AF48-12

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AF48-12 is a Gram-negative bacterium notable for its possession of flagella, which suggests it has motility capabilities. This characteristic may influence its ecological interactions and ability to colonize specific niches within its environment. The organism is characterized by having a single replicon, indicating a streamlined genetic structure that could be reflective of its adaptation strategies or evolutionary history. The accession number associated with Alistipes sp. AF48-12 is QUDJ00000000.1, which serves as a reference for its genomic data. This unique identifier allows for tracking and studying the bacterium's genetic makeup in various biological and ecological contexts. In summary, Alistipes sp. AF48-12 represents a motile, Gram-negative bacterium with a simple genomic architecture. Its traits suggest potential ecological roles that may include interactions with other microorganisms and contributions to nutrient cycling in its habitat. Understanding its biology further may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AF48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AF48-12 AF48-12.Scaf58, whole genome shotgun

Gene Summary

Adenine Count

738885 bp

Thymine Count

711408 bp

Guanine Count

846764 bp

Cytosine Count

866596 bp

Genome Length

3164445 bp

Protein-coding Genes

2493 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
energy-dependent translational throttle protein ettaDW082_08545Not AvailablePositive1953734 - 195541062911.9
hepn domain-containing proteinDW082_08550Not AvailablePositive1955424 - 195632034736.3
histidine--trna ligaseDW082_08555Not AvailablePositive1956342 - 195770950089.8
s41 family peptidaseDW082_08560Not AvailablePositive1957764 - 195935058123.2
duf3276 family proteinDW082_08565Not AvailablePositive1959503 - 195985313580.7
pp_01681DW082_08570Not AvailablePositive1959912 - 1960940Not Available
deda family proteinDW082_08575Not AvailablePositive1961071 - 196168523041.5
shikimate dehydrogenaseDW082_08580Not AvailablePositive1961687 - 196241826283.4
xre family transcriptional regulatorDW082_08590Not AvailableNegative1964225 - 196480621761.8
Trna-lysNot AvailableNot AvailablePositive1965162 - 1965234Not Available

Displaying genes 1541 – 1550 of 2543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.