Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trmh family rna methyltransferase | DW082_07375 | Not Available | Negative | 1692075 - 1692620 | 20068.8 |
| atp-dependent dethiobiotin synthetase biod | DW082_07385 | Not Available | Negative | 1695092 - 1695751 | 24411.4 |
| biotin synthase biob | DW082_07390 | Not Available | Positive | 1695818 - 1696777 | 35066.5 |
| duf1573 domain-containing protein | DW082_07395 | Not Available | Positive | 1696815 - 1697930 | 40884.9 |
| sulfide/dihydroorotate dehydrogenase-like fad/nad-binding protein | DW082_07400 | Not Available | Positive | 1697975 - 1698859 | 32408.6 |
| s-methyl-5-thioribose-1-phosphate isomerase | DW082_07410 | Not Available | Positive | 1700463 - 1701569 | 40928.1 |
| hypothetical protein | DW082_07415 | Not Available | Positive | 1701624 - 1701923 | 10859.8 |
| triose-phosphate isomerase | DW082_07425 | Not Available | Negative | 1703410 - 1704168 | 26947.4 |
| lysine--trna ligase | DW082_07430 | Not Available | Negative | 1704219 - 1705943 | 65393.7 |
| hypothetical protein | DW082_07435 | Not Available | Negative | 1706063 - 1708744 | 100604.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
