Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW082_07010 | Not Available | Positive | 1605848 - 1606369 | 19900.2 |
| hypothetical protein | DW082_07015 | Not Available | Positive | 1606499 - 1607740 | 46502.1 |
| duf1705 domain-containing protein | DW082_07020 | Not Available | Positive | 1607740 - 1609497 | 66612.6 |
| hypothetical protein | DW082_07025 | Not Available | Positive | 1609546 - 1611465 | 66924.1 |
| rlua family pseudouridine synthase | DW082_07030 | Not Available | Negative | 1611630 - 1612319 | 26076.3 |
| cytidine deaminase | DW082_07035 | Not Available | Negative | 1612337 - 1612798 | 16866.2 |
| transcriptional regulator | DW082_07040 | Not Available | Negative | 1612810 - 1613481 | 24867.3 |
| duf541 domain-containing protein | DW082_07045 | Not Available | Negative | 1613478 - 1614176 | 25763.2 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DW082_07050 | Not Available | Negative | 1614227 - 1615645 | 53263.2 |
| mbl fold metallo-hydrolase | DW082_07055 | Not Available | Positive | 1615716 - 1616381 | 24370.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
