Alistipes sp. AF48-12

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AF48-12 is a Gram-negative bacterium notable for its possession of flagella, which suggests it has motility capabilities. This characteristic may influence its ecological interactions and ability to colonize specific niches within its environment. The organism is characterized by having a single replicon, indicating a streamlined genetic structure that could be reflective of its adaptation strategies or evolutionary history. The accession number associated with Alistipes sp. AF48-12 is QUDJ00000000.1, which serves as a reference for its genomic data. This unique identifier allows for tracking and studying the bacterium's genetic makeup in various biological and ecological contexts. In summary, Alistipes sp. AF48-12 represents a motile, Gram-negative bacterium with a simple genomic architecture. Its traits suggest potential ecological roles that may include interactions with other microorganisms and contributions to nutrient cycling in its habitat. Understanding its biology further may provide insights into its ecological significance and potential applications in microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AF48-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AF48-12 AF48-12.Scaf58, whole genome shotgun

Gene Summary

Adenine Count

738885 bp

Thymine Count

711408 bp

Guanine Count

846764 bp

Cytosine Count

866596 bp

Genome Length

3164445 bp

Protein-coding Genes

2493 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rok family proteinDW082_05560Not AvailableNegative1275844 - 127681234443.7
leucine-rich repeat domain-containing proteinDW082_05565Not AvailableNegative1277061 - 127948488935.2
hypothetical proteinDW082_05570Not AvailableNegative1279384 - 128041538256.5
duf3575 domain-containing proteinDW082_05575Not AvailableNegative1280412 - 128175249447.4
atp-binding proteinDW082_05580Not AvailablePositive1282672 - 128380243450.3
Trna-serNot AvailableNot AvailablePositive1285623 - 1285710Not Available
tatd family deoxyribonucleaseDW082_05595Not AvailableNegative1285874 - 128666829624.5
dna-protecting protein dpraDW082_05600Not AvailableNegative1286662 - 128777440220.2
dtdp-glucose 4,6-dehydrataseDW082_05605Not AvailableNegative1287844 - 128890240655.8
dtdp-4-dehydrorhamnose reductaseDW082_05610Not AvailableNegative1288915 - 128977831267.2

Displaying genes 1001 – 1010 of 2543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.