Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes sp. AF48-12 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes sp. AF48-12
Accession NumberQUDJ00000000.1
Gene Summary
Adenine Count
738885 bp
Thymine Count
711408 bp
Guanine Count
846764 bp
Cytosine Count
866596 bp
Genome Length
3164445 bp
Protein-coding Genes
2493 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 10 - 1534 | Not Available |
| hypothetical protein | DW082_00005 | Not Available | - | 205 - 588 | 14683.2 |
| site-specific integrase | DW082_00010 | Not Available | - | 626 - 1798 | 44689.5 |
| 23s ribosomal rna | Not Available | Not Available | + | 2032 - 4907 | Not Available |
| vcbs repeat-containing protein | DW082_00015 | Not Available | + | 2148 - 5165 | 111481.0 |
| 5s ribosomal rna | Not Available | Not Available | + | 5011 - 5123 | Not Available |
| hypothetical protein | DW082_00020 | Not Available | + | 5590 - 5964 | 14142.4 |
| sigma-70 family rna polymerase sigma factor | DW082_00025 | Not Available | + | 5951 - 6532 | 22988.2 |
| hypothetical protein | DW082_00030 | Not Available | - | 6558 - 7727 | 42327.8 |
| mfs transporter | DW082_00045 | Not Available | - | 12079 - 13236 | 41916.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.