Alistipes sp. AF14-19

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AF14-19 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. This species possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for Alistipes sp. AF14-19 is cataloged under the accession number QTXM00000000.1. The Gram-negative classification of Alistipes sp. AF14-19 is significant as it indicates a complex cell wall structure, typically associated with an outer membrane containing lipopolysaccharides. This structural feature can affect the bacterium's interactions with its environment, including its resistance to certain antibiotics and its ability to thrive in diverse ecological niches. The motility conferred by flagella may play a crucial role in the bacterium's ecological interactions, allowing it to move toward favorable conditions or away from harmful environments. This characteristic could enhance its survival and colonization capabilities within different habitats. Overall, Alistipes sp. AF14-19 exemplifies the diverse adaptations found in the Alistipes genus, with its Gram-negative nature and motility potentially influencing its ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AF14-19
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AF14-19 AF14-19.Scaf58, whole genome shotgun

Gene Summary

Adenine Count

788754 bp

Thymine Count

780335 bp

Guanine Count

1042420 bp

Cytosine Count

1056764 bp

Genome Length

3668313 bp

Protein-coding Genes

3114 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rok family proteinDWW03_10875Not AvailablePositive2506164 - 250727039747.7
mannose-6-phosphate isomeraseDWW03_10880Not AvailablePositive2507283 - 250824835317.6
hypothetical proteinDWW03_10885Not AvailableNegative2508326 - 251057580417.9
duf4955 domain-containing proteinDWW03_10890Not AvailableNegative2510596 - 251317293135.0
arylsulfataseDWW03_10895Not AvailableNegative2513186 - 251472457375.3
sugar lyaseDWW03_10900Not AvailableNegative2514731 - 2517763112349.0
glucuronyl hydrolaseDWW03_10905Not AvailableNegative2517775 - 251898945436.5
chondroitinaseDWW03_10910Not AvailablePositive2519158 - 2522127110267.0
tonb-dependent receptorDWW03_10915Not AvailablePositive2522156 - 2525293115739.0
ragb/susd family nutrient uptake outer membrane proteinDWW03_10920Not AvailablePositive2525317 - 252714669903.9

Displaying genes 2171 – 2180 of 3210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.