Alistipes sp. AF14-19

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes sp. AF14-19 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. This species possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic information for Alistipes sp. AF14-19 is cataloged under the accession number QTXM00000000.1. The Gram-negative classification of Alistipes sp. AF14-19 is significant as it indicates a complex cell wall structure, typically associated with an outer membrane containing lipopolysaccharides. This structural feature can affect the bacterium's interactions with its environment, including its resistance to certain antibiotics and its ability to thrive in diverse ecological niches. The motility conferred by flagella may play a crucial role in the bacterium's ecological interactions, allowing it to move toward favorable conditions or away from harmful environments. This characteristic could enhance its survival and colonization capabilities within different habitats. Overall, Alistipes sp. AF14-19 exemplifies the diverse adaptations found in the Alistipes genus, with its Gram-negative nature and motility potentially influencing its ecological roles and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes sp. AF14-19
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes sp. AF14-19 AF14-19.Scaf58, whole genome shotgun

Gene Summary

Adenine Count

788754 bp

Thymine Count

780335 bp

Guanine Count

1042420 bp

Cytosine Count

1056764 bp

Genome Length

3668313 bp

Protein-coding Genes

3114 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent epimerase/dehydratase family proteinDWW03_06500Not AvailableNegative1532617 - 153358535934.9
dna repair protein radaDWW03_06505Not AvailableNegative1533855 - 153522248764.1
hypothetical proteinDWW03_06510Not AvailableNegative1535231 - 153588123475.2
lactate utilization proteinDWW03_06515Not AvailableNegative1535878 - 153651923806.7
rip metalloprotease rsepDWW03_06520Not AvailableNegative1536531 - 153784449658.8
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDWW03_06525Not AvailableNegative1537857 - 153901441700.1
m23 family peptidaseDWW03_06530Not AvailableNegative1539022 - 153988832295.1
nucleotidyltransferaseDWW03_06535Not AvailablePositive1540055 - 154093032594.6
hypothetical proteinDWW03_06540Not AvailableNegative1541348 - 154173714546.3
chromosome partitioning protein paraDWW03_06545Not AvailableNegative1541740 - 154419091494.6

Displaying genes 1311 – 1320 of 3210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.