Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage tail tape measure protein | DN590_10775 | Not Available | Negative | 2201746 - 2203665 | 67686.0 |
| Extracellular solute-binding protein family 7 protein | DN590_10780 | Not Available | Negative | 2203752 - 2204147 | 14440.4 |
| Tail tube protein | DN590_10785 | Not Available | Negative | 2204151 - 2204507 | 12624.1 |
| Tail sheath protein | DN590_10790 | Not Available | Negative | 2204517 - 2205995 | 53188.0 |
| Hypothetical protein | DN590_10795 | Not Available | Negative | 2205995 - 2206183 | 6904.31 |
| Hypothetical protein | DN590_10800 | Not Available | Negative | 2206164 - 2206787 | 23213.6 |
| Phage virion morphogenesis protein | DN590_10805 | Not Available | Negative | 2206784 - 2207326 | 20073.6 |
| Hypothetical protein | DN590_10810 | Not Available | Negative | 2207326 - 2207766 | 16769.9 |
| hypothetical protein | DN590_10815 | Not Available | Negative | 2207766 - 2208359 | 20755.2 |
| Major head subunit | DN590_10820 | Not Available | Negative | 2208443 - 2209336 | 32449.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

