Citrobacter freundii strain GEO_16_Eff_A

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii strain GEO_16_Eff_A is a Gram-negative, nonsporulating rod-shaped bacterium that exhibits facultative anaerobic metabolism. This strain has been isolated from diverse environments, including hospital sewage, intestinal tracts, sewage systems, soil, and surface waters, indicating its adaptability to various ecological niches. As a facultative anaerobe, Citrobacter freundii strain GEO_16_Eff_A can thrive in both aerobic and anaerobic conditions, allowing it to exploit a range of substrates for growth depending on the availability of oxygen. Its presence in hospital sewage and surface waters suggests it may play a role in nutrient cycling, particularly in environments impacted by human activity. The ability of this strain to inhabit complex environments like sewage and soil highlights its potential involvement in biogeochemical processes and its interaction with other microbial communities. Understanding the ecological roles of Citrobacter freundii in such varied habitats could provide insights into microbial dynamics and the impact of anthropogenic influences on microbial diversity and function in aquatic and terrestrial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii strain GEO_16_Eff_A

Accession NumberQKPL00000000.1

Gene Summary

Adenine Count

1321210 bp

Thymine Count

1313182 bp

Guanine Count

1404681 bp

Cytosine Count

1426347 bp

Genome Length

5465420 bp

Protein-coding Genes

5038 genes

Non-Coding Genes

330 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Dna invertaseDN590_10725Not Available-2194570 - 219512420592.9
Tail fiber assembly proteinDN590_10730Not Available-2195194 - 219577221155.5
hypotheticalDN590_10735Not Available+2196025 - 21961112935.41
Tail fiberDN590_10740Not Available-2196381 - 219670111517.8
Tail proteinDN590_10745Not Available-2196701 - 219729122637.2
Baseplate j-like proteinDN590_10750Not Available-2197276 - 219835238290.8
Muv-like tail proteinDN590_10755Not Available-2198342 - 219879416958.1
Putative baseplate assembly proteinDN590_10760Not Available-2198791 - 219933319601.6
Putative tail proteinDN590_10765Not Available-2199324 - 220041539891.4
Tail/dna circulation proteinDN590_10770Not Available-2200415 - 220174648442.2

Displaying genes 1 – 10 of 5368 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites