Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iibc | DN590_03470 | Not Available | Negative | 715966 - 717558 | 56700.7 |
| mal regulon transcriptional regulator mali | DN590_03475 | Not Available | Positive | 717728 - 718756 | 36658.9 |
| hypothetical protein | DN590_03480 | Not Available | Negative | 718804 - 720312 | 54330.8 |
| mannose-6-phosphate isomerase | DN590_03485 | Not Available | Negative | 720419 - 721594 | 42517.8 |
| fumarate hydratase | DN590_03490 | Not Available | Positive | 721857 - 723503 | 60260.8 |
| class ii fumarate hydratase | DN590_03495 | Not Available | Positive | 723645 - 725048 | 50560.1 |
| dna replication terminus site-binding protein | DN590_03500 | Not Available | Negative | 725045 - 725974 | 35726.2 |
| two-component system sensor histidine kinase rstb | DN590_03505 | Not Available | Negative | 726048 - 727349 | 49366.0 |
| hypothetical protein | DN590_03510 | Not Available | Negative | 727582 - 728100 | 19442.8 |
| duf1294 domain-containing protein | DN590_03515 | Not Available | Positive | 728335 - 728679 | 12887.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

