Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxb | DN590_03420 | Not Available | Negative | 707542 - 708120 | 20559.9 |
| electron transport complex subunit a | DN590_03425 | Not Available | Negative | 708120 - 708701 | 20870.8 |
| duf2569 domain-containing protein | DN590_03430 | Not Available | Negative | 708777 - 709217 | 16301.5 |
| transcription modulator ydgt | DN590_03435 | Not Available | Negative | 709309 - 709524 | 8372.99 |
| division septum protein blr | DN590_03440 | Not Available | Negative | 709816 - 709971 | 5648.04 |
| oxidoreductase | DN590_03445 | Not Available | Positive | 710183 - 711223 | 38302.6 |
| adenosine deaminase | DN590_03450 | Not Available | Negative | 711328 - 712329 | 36144.2 |
| dna breaking-rejoining protein | DN590_03455 | Not Available | Positive | 712804 - 713190 | 13940.8 |
| ggdef domain-containing protein | DN590_03460 | Not Available | Negative | 713235 - 714584 | 51833.7 |
| transcriptional regulator | DN590_03465 | Not Available | Negative | 714783 - 715955 | 43886.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

