Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | DN590_03365 | Not Available | Positive | 696524 - 697180 | 25422.4 |
| tyrosine--trna ligase | DN590_03370 | Not Available | Positive | 697307 - 698581 | 47345.2 |
| pyridoxal kinase pdxy | DN590_03375 | Not Available | Positive | 698646 - 699506 | 31070.6 |
| glutathione transferase gsta | DN590_03380 | Not Available | Negative | 699590 - 700195 | 22486.2 |
| dipeptide/tripeptide permease dtpa | DN590_03385 | Not Available | Negative | 700300 - 701805 | 54430.9 |
| endonuclease iii | DN590_03395 | Not Available | Negative | 702419 - 703054 | 23535.6 |
| electron transport complex subunit rsxe | DN590_03400 | Not Available | Negative | 703054 - 703746 | 24250.3 |
| electron transport complex subunit rsxg | DN590_03405 | Not Available | Negative | 703749 - 704369 | 22046.1 |
| electron transport complex subunit rsxd | DN590_03410 | Not Available | Negative | 704379 - 705431 | 37900.1 |
| electron transport complex subunit rsxc | DN590_03415 | Not Available | Negative | 705432 - 707549 | 75945.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

