Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1289 domain-containing protein | DN590_03315 | Not Available | Positive | 688598 - 688837 | 9456.33 |
| aldo/keto reductase family oxidoreductase | DN590_03320 | Not Available | Positive | 688887 - 689783 | 33449.4 |
| superoxide dismutase | DN590_03325 | Not Available | Positive | 689865 - 690389 | 17806.4 |
| fusc family protein | DN590_03330 | Not Available | Negative | 690390 - 692405 | 75507.5 |
| efflux transporter periplasmic adaptor subunit | DN590_03335 | Not Available | Negative | 692402 - 693301 | 33111.5 |
| duf1656 domain-containing protein | DN590_03340 | Not Available | Negative | 693268 - 693504 | 9005.54 |
| transcriptional regulator slya | DN590_03345 | Not Available | Positive | 693697 - 694137 | 16543.3 |
| outer membrane lipoprotein slyb | DN590_03350 | Not Available | Negative | 694184 - 694651 | 15513.7 |
| anhydro-n-acetylmuramic acid kinase | DN590_03355 | Not Available | Positive | 694926 - 696047 | 39985.2 |
| c-type lysozyme inhibitor | DN590_03360 | Not Available | Positive | 696135 - 696464 | 12531.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

