Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor purr | DN590_03260 | Not Available | Negative | 680437 - 681462 | 38120.8 |
| ynhf family membrane protein | DN590_03270 | Not Available | Positive | 681760 - 681849 | 2955.79 |
| mfs transporter | DN590_03275 | Not Available | Positive | 682025 - 683194 | 40107.4 |
| superoxide dismutase | DN590_03280 | Not Available | Negative | 683234 - 683815 | 21261.8 |
| endopeptidase | DN590_03285 | Not Available | Negative | 683943 - 684761 | 30052.2 |
| glutaredoxin | DN590_03290 | Not Available | Positive | 685096 - 685443 | 12923.5 |
| ribonuclease t | DN590_03295 | Not Available | Negative | 685497 - 686144 | 23546.1 |
| lactoylglutathione lyase | DN590_03300 | Not Available | Negative | 686240 - 686647 | 14893.6 |
| alkene reductase | DN590_03305 | Not Available | Negative | 686745 - 687842 | 39427.6 |
| tetr/acrr family transcriptional regulator | DN590_03310 | Not Available | Negative | 687897 - 688496 | 22133.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

