Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin family protein | DN590_12290 | Not Available | Negative | 2499984 - 2500382 | 13601.0 |
| Bacteriophage antiterminator protein q | DN590_12295 | Not Available | Negative | 2500643 - 2501332 | 26393.4 |
| Hypothetical protein | DN590_12300 | Not Available | Negative | 2501329 - 2501547 | 8001.64 |
| Putative recombination endonuclease | DN590_12305 | Not Available | Negative | 2501544 - 2502149 | 23709.1 |
| Hypothetical protein | DN590_12310 | Not Available | Negative | 2502152 - 2502358 | 8059.49 |
| Hypothetical protein | DN590_12315 | Not Available | Negative | 2502358 - 2502954 | 22706.9 |
| Eaa protein | DN590_12320 | Not Available | Negative | 2503824 - 2504183 | 13338.8 |
| hypothetical protein | DN590_12325 | Not Available | Negative | 2504475 - 2505020 | 19628.1 |
| hypothetical protein | DN590_12330 | Not Available | Negative | 2505017 - 2505217 | 7415.83 |
| Gp43 | DN590_12335 | Not Available | Negative | 2505214 - 2505666 | 16374.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

