Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr family transcriptional regulator | DN590_03000 | Not Available | Negative | 628193 - 628924 | 27022.6 |
| 2-dehydro-3-deoxygalactonokinase | DN590_03005 | Not Available | Positive | 629118 - 630017 | 32979.5 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DN590_03010 | Not Available | Positive | 630010 - 630672 | 23566.5 |
| mfs transporter | DN590_03015 | Not Available | Positive | 630692 - 632062 | 50867.8 |
| dihydroxy-acid dehydratase | DN590_03020 | Not Available | Positive | 632059 - 633774 | 61194.9 |
| dihydrodipicolinate synthase family protein | DN590_03025 | Not Available | Positive | 633771 - 634673 | 33690.9 |
| amino acid permease | DN590_03030 | Not Available | Positive | 634975 - 636456 | 53689.4 |
| hypothetical protein | DN590_03035 | Not Available | Negative | 636478 - 637176 | 26191.8 |
| fadr family transcriptional regulator | DN590_03040 | Not Available | Negative | 637201 - 637926 | 26636.1 |
| gamma-aminobutyraldehyde dehydrogenase | DN590_03045 | Not Available | Positive | 638242 - 639669 | 51259.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

