Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydhw family putative oxidoreductase system protein | DN590_02950 | Not Available | Positive | 620596 - 621261 | 24882.9 |
| thiosulfate reductase electron transport protein phsb | DN590_02955 | Not Available | Positive | 621326 - 621994 | 24997.8 |
| thiosulfate reductase cytochrome b subunit | DN590_02960 | Not Available | Positive | 621991 - 622776 | 29327.4 |
| hypothetical protein | DN590_02965 | Not Available | Positive | 622780 - 623592 | 28834.8 |
| amino acid abc transporter permease | DN590_02970 | Not Available | Negative | 623602 - 624279 | 24460.6 |
| amino acid abc transporter permease | DN590_02975 | Not Available | Negative | 624269 - 625054 | 28884.5 |
| amino acid abc transporter atp-binding protein | DN590_02980 | Not Available | Negative | 625054 - 625872 | 29766.9 |
| cysteine abc transporter substrate-binding protein | DN590_02985 | Not Available | Negative | 625874 - 626707 | 29510.7 |
| lysr family transcriptional regulator | DN590_02990 | Not Available | Positive | 627013 - 627906 | 33264.9 |
| hypothetical protein | DN590_02995 | Not Available | Negative | 627959 - 628099 | 5167.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

