Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster-binding protein | DN590_02900 | Not Available | Negative | 607515 - 608942 | 52903.7 |
| (fe-s)-binding protein | DN590_02905 | Not Available | Negative | 608953 - 609672 | 26079.0 |
| l-lactate permease | DN590_02910 | Not Available | Positive | 610254 - 611807 | 55136.6 |
| pyridoxal kinase | DN590_02915 | Not Available | Negative | 612308 - 613165 | 31739.5 |
| tryptophan permease | DN590_02920 | Not Available | Negative | 613177 - 614442 | 45418.7 |
| tyrosine phenol-lyase | DN590_02925 | Not Available | Negative | 614632 - 616002 | 51501.9 |
| endoribonuclease syme | DN590_02930 | Not Available | Positive | 616780 - 617142 | 13501.5 |
| is3 family transposase | DN590_02935 | Not Available | Negative | 617178 - 617389 | 8072.63 |
| 4fe-4s dicluster domain-containing protein | DN590_02940 | Not Available | Positive | 617736 - 618362 | 22399.1 |
| aldehyde ferredoxin oxidoreductase | DN590_02945 | Not Available | Positive | 618483 - 620585 | 77404.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

