Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DN590_02850 | Not Available | Positive | 597052 - 597516 | 18025.5 |
| mfs transporter | DN590_02855 | Not Available | Positive | 597608 - 598795 | 41780.7 |
| hypothetical protein | DN590_02860 | Not Available | Positive | 598987 - 599388 | 14906.0 |
| phosphoporin phoe | DN590_02865 | Not Available | Negative | 599451 - 600458 | 36381.5 |
| hypothetical protein | DN590_02870 | Not Available | Negative | 600646 - 600849 | 7854.37 |
| gntr family transcriptional regulator | DN590_02875 | Not Available | Negative | 601483 - 602256 | 29593.1 |
| fructuronate reductase | DN590_02880 | Not Available | Negative | 602432 - 603907 | 53960.6 |
| mannonate dehydratase | DN590_02885 | Not Available | Negative | 603988 - 605172 | 44832.4 |
| gluconate permease | DN590_02890 | Not Available | Positive | 605434 - 606777 | 47215.0 |
| lactate utilization protein c | DN590_02895 | Not Available | Negative | 606827 - 607522 | 25066.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

