Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isncy family transposase | DN590_02800 | Not Available | Negative | 586973 - 587887 | 34702.9 |
| hypothetical protein | DN590_02805 | Not Available | Negative | 587884 - 588072 | 7167.78 |
| arac family transcriptional regulator | DN590_02810 | Not Available | Positive | 588118 - 588933 | 31084.9 |
| lyse family translocator | DN590_02815 | Not Available | Positive | 588982 - 589632 | 23365.8 |
| mfs transporter | DN590_02820 | Not Available | Positive | 589958 - 591199 | 44796.2 |
| duf1440 domain-containing protein | DN590_02825 | Not Available | Negative | 591284 - 591844 | 21111.0 |
| cystathionine beta-lyase | DN590_02830 | Not Available | Negative | 592083 - 593273 | 43591.1 |
| dicarboxylate/amino acid:cation symporter | DN590_02835 | Not Available | Negative | 593304 - 594536 | 43047.4 |
| lysr family transcriptional regulator | DN590_02840 | Not Available | Positive | 594756 - 595682 | 34586.5 |
| duf445 domain-containing protein | DN590_02845 | Not Available | Positive | 595758 - 597038 | 48036.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

