Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DN590_02750 | Not Available | Positive | 576063 - 576578 | 19011.0 |
| methyl-accepting chemotaxis protein | DN590_02755 | Not Available | Negative | 576781 - 578442 | 60058.2 |
| carbon starvation protein a | DN590_02760 | Not Available | Positive | 578807 - 580957 | 77192.3 |
| duf466 domain-containing protein | DN590_02765 | Not Available | Positive | 581160 - 581354 | 7361.72 |
| gtpase | DN590_02770 | Not Available | Positive | 581367 - 582323 | 35567.7 |
| 1,4-alpha-glucan branching protein | DN590_02775 | Not Available | Negative | 582427 - 583491 | 39346.4 |
| hlyd family secretion protein | DN590_02780 | Not Available | Negative | 583481 - 584548 | 39613.1 |
| marr family transcriptional regulator | DN590_02785 | Not Available | Negative | 584555 - 585019 | 17669.4 |
| duf1127 domain-containing protein | DN590_02790 | Not Available | Negative | 585167 - 585331 | 6688.15 |
| gntr family transcriptional regulator | DN590_02795 | Not Available | Positive | 585509 - 586921 | 52615.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

