Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_02700 | Not Available | Positive | 564978 - 565844 | 31646.3 |
| threonine/serine exporter | DN590_02705 | Not Available | Positive | 565835 - 566308 | 17092.7 |
| primosomal protein dnat | DN590_02710 | Not Available | Positive | 566433 - 566972 | 19475.1 |
| aaa family atpase | DN590_02715 | Not Available | Positive | 566975 - 567712 | 28069.9 |
| duf2501 domain-containing protein | DN590_02720 | Not Available | Positive | 567783 - 568274 | 17121.3 |
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | DN590_02725 | Not Available | Positive | 568505 - 570796 | 85264.3 |
| tagaturonate reductase | DN590_02730 | Not Available | Negative | 570902 - 572347 | 54043.5 |
| galactonate oxidoreductase | DN590_02735 | Not Available | Negative | 572361 - 573383 | 36501.0 |
| gntr family transcriptional regulator | DN590_02740 | Not Available | Positive | 573521 - 574435 | 35163.1 |
| mfs transporter | DN590_02745 | Not Available | Positive | 574649 - 576010 | 49484.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

