Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 558163 - 558249 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 558278 - 558363 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 558396 - 558481 | Not Available |
| duf1435 domain-containing protein | DN590_02665 | Not Available | Negative | 558521 - 558757 | 8633.23 |
| ggdef domain-containing protein | DN590_02670 | Not Available | Positive | 559013 - 560089 | 40434.9 |
| hydroxamate siderophore iron reductase fhuf | DN590_02675 | Not Available | Positive | 560198 - 560986 | 29983.5 |
| pts cellobiose transporter subunit iic | DN590_02680 | Not Available | Negative | 561016 - 562359 | 49242.8 |
| ybak/ebsc family protein | DN590_02685 | Not Available | Positive | 562725 - 563183 | 16260.7 |
| helix-turn-helix transcriptional regulator | DN590_02690 | Not Available | Negative | 563241 - 563918 | 24875.3 |
| dna-binding response regulator | DN590_02695 | Not Available | Negative | 563879 - 564604 | 27077.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

