Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjjw family glycine radical enzyme activase | DN590_02600 | Not Available | Positive | 549256 - 550119 | 31929.7 |
| metal-dependent hydrolase | DN590_02605 | Not Available | Negative | 550418 - 551194 | 29043.9 |
| patatin family protein | DN590_02610 | Not Available | Negative | 551191 - 552264 | 39499.6 |
| duf1328 domain-containing protein | DN590_02615 | Not Available | Negative | 552385 - 552564 | 6278.2 |
| molecular chaperone osmy | DN590_02620 | Not Available | Negative | 552674 - 553291 | 21415.3 |
| peptide chain release factor 3 | DN590_02625 | Not Available | Negative | 553600 - 555189 | 59732.9 |
| dump phosphatase | DN590_02630 | Not Available | Negative | 555282 - 555962 | 25523.3 |
| ribosomal-protein-alanine n-acetyltransferase rimi | DN590_02635 | Not Available | Negative | 555977 - 556423 | 16700.9 |
| dna polymerase iii subunit psi | DN590_02640 | Not Available | Negative | 556392 - 556805 | 15336.5 |
| 16s rrna (guanine(1207)-n(2))-methyltransferase rsmc | DN590_02645 | Not Available | Positive | 556909 - 557940 | 37702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

