Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | DN590_02550 | Not Available | Negative | 538642 - 540024 | 49501.2 |
| phosphoserine phosphatase | DN590_02555 | Not Available | Negative | 540108 - 541076 | 35004.8 |
| phosphoserine phosphatase | DN590_02560 | Not Available | Negative | 541111 - 541224 | 4110.99 |
| ytjb family periplasmic protein | DN590_02565 | Not Available | Positive | 541192 - 541833 | 23938.2 |
| lipoate--protein ligase lpla | DN590_02570 | Not Available | Positive | 541871 - 542887 | 37951.7 |
| purine-nucleoside phosphorylase | DN590_02575 | Not Available | Negative | 543037 - 543756 | 25980.5 |
| phosphopentomutase | DN590_02580 | Not Available | Negative | 543960 - 545183 | 44237.3 |
| thymidine phosphorylase | DN590_02585 | Not Available | Negative | 545235 - 546557 | 46985.6 |
| deoxyribose-phosphate aldolase | DN590_02590 | Not Available | Negative | 546693 - 547490 | 28371.1 |
| yjji family glycine radical enzyme | DN590_02595 | Not Available | Positive | 547734 - 549284 | 58104.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

