Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_12240 | Not Available | Negative | 2493401 - 2493610 | 8102.86 |
| Head morphogenesis protein | DN590_12245 | Not Available | Negative | 2493614 - 2494720 | 41267.3 |
| Portal protein | DN590_12250 | Not Available | Negative | 2494722 - 2496122 | 51963.8 |
| Terminase large subunit | DN590_12255 | Not Available | Negative | 2496127 - 2497698 | 59294.2 |
| Terminase small subunit | DN590_12260 | Not Available | Negative | 2497695 - 2498345 | 24198.8 |
| hypothetical protein | DN590_12265 | Not Available | Positive | 2498469 - 2498711 | 8909.34 |
| Hypothetical protein | DN590_12270 | Not Available | Negative | 2498750 - 2498941 | 7065.54 |
| Hypothetical protein | DN590_12275 | Not Available | Negative | 2498898 - 2499170 | 9765.75 |
| Endolysin | DN590_12280 | Not Available | Negative | 2499167 - 2499709 | 20204.8 |
| Putative holin | DN590_12285 | Not Available | Negative | 2499706 - 2499987 | 10451.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

