Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:alanine symporter family protein | DN590_02445 | Not Available | Positive | 517021 - 518451 | 51485.8 |
| peroxide stress protein yaaa | DN590_02450 | Not Available | Positive | 518529 - 519302 | 29275.1 |
| threonine synthase | DN590_02455 | Not Available | Negative | 519387 - 520673 | 47030.3 |
| homoserine kinase | DN590_02460 | Not Available | Negative | 520677 - 521606 | 33223.2 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DN590_02465 | Not Available | Negative | 521608 - 524070 | 88856.1 |
| thr operon leader peptide | DN590_02470 | Not Available | Negative | 524150 - 524215 | 2150.67 |
| trna/rrna methyltransferase | DN590_02475 | Not Available | Negative | 524427 - 525113 | 25331.7 |
| hypothetical protein | DN590_02480 | Not Available | Negative | 525513 - 525653 | 4857.09 |
| two-component system response regulator arca | DN590_02485 | Not Available | Positive | 525749 - 526465 | 27292.7 |
| cell envelope integrity protein cred | DN590_02490 | Not Available | Negative | 526525 - 527886 | 50223.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

