Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator nhar | DN590_02390 | Not Available | Negative | 503023 - 503916 | 33830.7 |
| na+/h+ antiporter nhaa | DN590_02395 | Not Available | Negative | 503955 - 505121 | 41258.3 |
| helicase | DN590_02400 | Not Available | Positive | 505370 - 508699 | 126465.0 |
| molecular chaperone dnaj | DN590_02405 | Not Available | Negative | 508768 - 509901 | 40998.7 |
| molecular chaperone dnak | DN590_02410 | Not Available | Negative | 509987 - 511909 | 69323.1 |
| duf2541 family protein | DN590_02420 | Not Available | Positive | 512294 - 512698 | 14466.5 |
| acetate uptake transporter | DN590_02425 | Not Available | Positive | 513063 - 513629 | 20057.1 |
| mfs transporter | DN590_02430 | Not Available | Negative | 513664 - 514971 | 47339.5 |
| molybdopterin adenylyltransferase | DN590_02435 | Not Available | Negative | 515096 - 515683 | 21037.5 |
| transaldolase | DN590_02440 | Not Available | Negative | 515794 - 516747 | 35123.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

