Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | DN590_02335 | Not Available | Negative | 491014 - 491577 | 20659.6 |
| ribonucleoside hydrolase rihc | DN590_02340 | Not Available | Negative | 491675 - 492589 | 32819.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DN590_02345 | Not Available | Negative | 492655 - 493605 | 34422.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DN590_02350 | Not Available | Negative | 493607 - 494056 | 16065.9 |
| lipoprotein signal peptidase | DN590_02355 | Not Available | Negative | 494174 - 494671 | 18291.6 |
| isoleucine--trna ligase | DN590_02360 | Not Available | Negative | 494671 - 497487 | 104182.0 |
| bifunctional riboflavin kinase/fad synthetase | DN590_02365 | Not Available | Negative | 497525 - 498463 | 34573.1 |
| 30s ribosomal protein s20 | DN590_02375 | Not Available | Positive | 498792 - 499055 | 9685.97 |
| mfs transporter | DN590_02380 | Not Available | Positive | 499515 - 500885 | 50113.3 |
| family 31 glucosidase | DN590_02385 | Not Available | Positive | 500929 - 502968 | 78469.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

