Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | DN590_02285 | Not Available | Negative | 478817 - 482041 | 117980.0 |
| carbamoyl-phosphate synthase small subunit | DN590_02290 | Not Available | Negative | 482059 - 483207 | 41313.1 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DN590_02295 | Not Available | Negative | 483663 - 484484 | 28823.6 |
| laci family transcriptional regulator | DN590_02300 | Not Available | Negative | 484618 - 485625 | 36340.7 |
| mannose-6-phosphate isomerase | DN590_02305 | Not Available | Positive | 485814 - 487559 | 65845.8 |
| pts fructose transporter subunit iia | DN590_02310 | Not Available | Positive | 487564 - 487992 | 14889.0 |
| pts mannose/fructose/sorbose transporter subunit iib | DN590_02315 | Not Available | Positive | 488004 - 488498 | 18006.7 |
| pts sugar transporter subunit iic | DN590_02320 | Not Available | Positive | 488509 - 489309 | 28504.8 |
| pts system mannose/fructose/sorbose family transporter subunit iid | DN590_02325 | Not Available | Positive | 489309 - 490127 | 29481.2 |
| glucose-6-phosphate isomerase | DN590_02330 | Not Available | Negative | 490239 - 491021 | 29695.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

