Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DN590_02035 | Not Available | Negative | 424293 - 425354 | 39637.3 |
| hypothetical protein | DN590_02040 | Not Available | Negative | 425423 - 425812 | 14181.0 |
| leu operon leader peptide | DN590_02045 | Not Available | Positive | 426284 - 426370 | 3201.95 |
| 2-isopropylmalate synthase | DN590_02050 | Not Available | Positive | 426461 - 428032 | 57468.4 |
| 3-isopropylmalate dehydrogenase | DN590_02055 | Not Available | Positive | 428032 - 429123 | 39457.2 |
| 3-isopropylmalate dehydratase large subunit | DN590_02060 | Not Available | Positive | 429126 - 430526 | 49863.6 |
| 3-isopropylmalate dehydratase small subunit | DN590_02065 | Not Available | Positive | 430537 - 431142 | 22528.7 |
| laci family dna-binding transcriptional regulator | DN590_02070 | Not Available | Negative | 431188 - 432180 | 36662.1 |
| mfs transporter | DN590_02075 | Not Available | Negative | 432263 - 433546 | 47562.3 |
| gluconate 5-dehydrogenase | DN590_02080 | Not Available | Negative | 433730 - 434494 | 27503.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

