Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DN590_01830 | Not Available | Negative | 381025 - 381564 | 20160.9 |
| hypothetical protein | DN590_01835 | Not Available | Positive | 381732 - 383321 | 60483.7 |
| alpha,alpha-trehalase tref | DN590_01840 | Not Available | Negative | 383349 - 384998 | 63573.7 |
| cytochrome-c peroxidase | DN590_01845 | Not Available | Positive | 385426 - 386820 | 51460.1 |
| lysr family transcriptional regulator | DN590_01850 | Not Available | Negative | 386886 - 387812 | 34571.6 |
| mandelate racemase | DN590_01855 | Not Available | Positive | 387996 - 389159 | 43045.4 |
| glutathione-disulfide reductase | DN590_01860 | Not Available | Negative | 389245 - 390597 | 48685.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | DN590_01865 | Not Available | Negative | 390702 - 391544 | 32029.4 |
| oligopeptidase a | DN590_01870 | Not Available | Positive | 391753 - 393795 | 77192.3 |
| 16s rrna (guanine(1516)-n(2))-methyltransferase rsmj | DN590_01875 | Not Available | Positive | 393804 - 394553 | 26893.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

