Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide abc transporter permease dppc | DN590_01725 | Not Available | Positive | 357989 - 358891 | 32137.3 |
| dipeptide abc transporter atp-binding protein | DN590_01730 | Not Available | Positive | 358902 - 359885 | 35727.5 |
| abc transporter atp-binding protein | DN590_01735 | Not Available | Positive | 359882 - 360886 | 37426.6 |
| aaa family atpase | DN590_01740 | Not Available | Positive | 361063 - 362265 | 45416.4 |
| transporter | DN590_01745 | Not Available | Negative | 362301 - 363599 | 48101.4 |
| methionine gamma-lyase | DN590_01750 | Not Available | Negative | 363717 - 364913 | 42910.5 |
| type i toxin-antitoxin system toxin ldr family protein | DN590_01755 | Not Available | Positive | 365339 - 365446 | 3851.79 |
| biofilm formation regulator hmsp | DN590_01760 | Not Available | Positive | 365673 - 367679 | 75422.5 |
| dicarboxylate/amino acid:cation symporter | DN590_01770 | Not Available | Positive | 367837 - 369123 | 45470.2 |
| hypothetical protein | DN590_01775 | Not Available | Negative | 369032 - 369283 | 9209.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

