Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | DN590_01670 | Not Available | Negative | 349154 - 349723 | 21290.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | DN590_01675 | Not Available | Positive | 349883 - 350584 | 25611.6 |
| oxalate/formate antiport family mfs transporter | DN590_01680 | Not Available | Positive | 350836 - 352038 | 42684.9 |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | DN590_01685 | Not Available | Positive | 352249 - 353943 | 64424.8 |
| Trna-pro | Not Available | Not Available | Positive | 354035 - 354111 | Not Available |
| hypothetical protein | DN590_01700 | Not Available | Positive | 354620 - 354808 | 7336.11 |
| hypothetical protein | DN590_01705 | Not Available | Negative | 354843 - 355037 | 7438.93 |
| abc transporter substrate-binding protein | DN590_01710 | Not Available | Positive | 355186 - 356793 | 60221.6 |
| hypothetical protein | DN590_01715 | Not Available | Negative | 356794 - 356997 | 7532.28 |
| dipeptide abc transporter permease dppb | DN590_01720 | Not Available | Positive | 356960 - 357979 | 37457.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

