Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase | DN590_01520 | Not Available | Negative | 316489 - 317991 | 55132.7 |
| mfs transporter | DN590_01525 | Not Available | Negative | 318079 - 319398 | 47518.4 |
| duf4862 domain-containing protein | DN590_01530 | Not Available | Negative | 319430 - 320362 | 34174.7 |
| yhch/yjgk/yial family protein | DN590_01535 | Not Available | Negative | 320377 - 320841 | 17529.2 |
| 3-dehydro-l-gulonate 2-dehydrogenase | DN590_01540 | Not Available | Negative | 320853 - 321851 | 36643.9 |
| iclr family transcriptional regulator | DN590_01545 | Not Available | Positive | 322069 - 322884 | 29857.1 |
| 4fe-4s dicluster domain-containing protein | DN590_01550 | Not Available | Positive | 322990 - 323463 | 16998.6 |
| valine--pyruvate transaminase | DN590_01555 | Not Available | Negative | 323498 - 324748 | 46733.8 |
| alpha-amylase | DN590_01560 | Not Available | Negative | 324925 - 326955 | 75295.2 |
| protein bax | DN590_01565 | Not Available | Positive | 327272 - 328096 | 30909.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

