Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3302 domain-containing protein | DN590_01470 | Not Available | Positive | 306399 - 306722 | 12307.2 |
| hlyd family secretion protein | DN590_01475 | Not Available | Positive | 306728 - 307864 | 41705.4 |
| lysr family transcriptional regulator | DN590_01480 | Not Available | Negative | 307881 - 308831 | 36215.6 |
| mipa/ompv family protein | DN590_01485 | Not Available | Positive | 308953 - 309693 | 27279.8 |
| glycoside hydrolase family 127 protein | DN590_01490 | Not Available | Negative | 309781 - 311736 | 74342.4 |
| mfs transporter | DN590_01495 | Not Available | Negative | 311747 - 313147 | 51507.1 |
| arac family transcriptional regulator | DN590_01500 | Not Available | Positive | 313400 - 314215 | 30690.2 |
| l-ribulose-5-phosphate 4-epimerase | DN590_01505 | Not Available | Negative | 314282 - 314980 | 25718.6 |
| xylulose 5-phosphate 3-epimerase | DN590_01510 | Not Available | Negative | 314974 - 315834 | 32393.8 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | DN590_01515 | Not Available | Negative | 315827 - 316489 | 23547.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

