Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mltr family transcriptional regulator | DN590_01420 | Not Available | Negative | 293235 - 293822 | 22027.7 |
| mannitol-1-phosphate 5-dehydrogenase | DN590_01425 | Not Available | Negative | 293822 - 294970 | 41118.4 |
| pts mannitol transporter subunit iicba | DN590_01430 | Not Available | Negative | 295191 - 297107 | 68136.6 |
| duf3302 domain-containing protein | DN590_01435 | Not Available | Positive | 297639 - 298001 | 13782.8 |
| hypothetical protein | DN590_01440 | Not Available | Positive | 298004 - 299140 | 41761.4 |
| glutathione s-transferase | DN590_01445 | Not Available | Positive | 299238 - 299846 | 22410.2 |
| l-seryl-trna(sec) selenium transferase | DN590_01450 | Not Available | Positive | 299945 - 301336 | 50608.1 |
| selenocysteinyl-trna-specific translation elongation factor selb | DN590_01455 | Not Available | Positive | 301333 - 303177 | 68703.4 |
| l-threonine dehydrogenase | DN590_01460 | Not Available | Positive | 303366 - 304517 | 40253.6 |
| aldehyde dehydrogenase | DN590_01465 | Not Available | Positive | 304610 - 306148 | 56410.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

