Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export protein secb | DN590_01370 | Not Available | Positive | 285402 - 285869 | 17246.2 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | DN590_01375 | Not Available | Positive | 285869 - 286888 | 36282.8 |
| serine o-acetyltransferase | DN590_01380 | Not Available | Positive | 286966 - 287787 | 29298.5 |
| l-asparaginase | DN590_01385 | Not Available | Positive | 287812 - 287916 | 3709.54 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | DN590_01390 | Not Available | Negative | 287969 - 288442 | 17559.2 |
| alpha-hydroxy-acid oxidizing protein | DN590_01395 | Not Available | Negative | 288483 - 289673 | 43080.9 |
| transcriptional regulator lldr | DN590_01400 | Not Available | Negative | 289670 - 290446 | 28822.4 |
| l-lactate permease | DN590_01405 | Not Available | Negative | 290443 - 292098 | 59401.8 |
| yibl family ribosome-associated protein | DN590_01410 | Not Available | Negative | 292361 - 292723 | 13834.9 |
| hypothetical protein | DN590_01415 | Not Available | Positive | 293016 - 293222 | 8019.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

