Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_01270 | Not Available | Positive | 265055 - 265288 | 9018.43 |
| glycosyltransferase family 1 protein | DN590_01275 | Not Available | Positive | 265444 - 266568 | 42409.5 |
| lipopolysaccharide core heptose(i) kinase rfap | DN590_01280 | Not Available | Positive | 266561 - 267358 | 31162.3 |
| lipopolysaccharide 1,2-glucosyltransferase | DN590_01285 | Not Available | Positive | 267389 - 268408 | 39791.5 |
| lipopolysaccharide 1,2-glucosyltransferase | DN590_01290 | Not Available | Positive | 268456 - 269445 | 38143.7 |
| glycosyltransferase family 8 protein | DN590_01295 | Not Available | Negative | 269472 - 270416 | 37421.6 |
| lipopolysaccharide core heptosyltransferase rfaq | DN590_01300 | Not Available | Negative | 270417 - 271472 | 40199.8 |
| glycosyltransferase family 2 protein | DN590_01305 | Not Available | Negative | 271474 - 272487 | 39445.9 |
| ligase | DN590_01310 | Not Available | Negative | 272480 - 273658 | 42956.5 |
| lipopolysaccharide heptosyltransferase rfac | DN590_01315 | Not Available | Negative | 273780 - 274748 | 36022.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

