Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is630-like element isec33 family transposase | DN590_27615 | Not Available | Negative | 5446476 - 5447507 | 39607.2 |
| is5-like element iskpn26 family transposase | DN590_27620 | Not Available | Positive | 5447612 - 5448582 | 37333.0 |
| is5/is1182 family transposase | DN590_27625 | Not Available | Positive | 5448730 - 5448881 | 5371.61 |
| is630 family transposase | DN590_27640 | Not Available | Negative | 5449703 - 5449805 | 3821.72 |
| qace family quaternary ammonium compound efflux smr transporter | DN590_27645 | Not Available | Positive | 5449806 - 5450010 | 7270.19 |
| sulfonamide-resistant dihydropteroate synthase sul1 | DN590_27650 | Not Available | Positive | 5450004 - 5450843 | 30128.0 |
| is6 family transposase | DN590_27655 | Not Available | Positive | 5450868 - 5450942 | 2724.26 |
| non-heme ferritin-like protein | DN590_27660 | Not Available | Positive | 5451269 - 5451769 | 19032.6 |
| elongation factor tu | DN590_27665 | Not Available | Positive | 5451924 - 5452885 | 35640.8 |
| class a beta-lactamase | DN590_27670 | Not Available | Positive | 5453078 - 5453811 | 27053.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

