Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_27505 | Not Available | Negative | 5428360 - 5428665 | 11612.6 |
| hypothetical protein | DN590_27510 | Not Available | Negative | 5428688 - 5429005 | 11982.5 |
| is6 family transposase | DN590_27515 | Not Available | Negative | 5429249 - 5429330 | 3489.39 |
| cupin fold metalloprotein, wbuc family | DN590_27520 | Not Available | Negative | 5429478 - 5429954 | 17756.0 |
| phosphoethanolamine--lipid a transferase | DN590_27525 | Not Available | Negative | 5430031 - 5431650 | 61005.7 |
| is5/is1182 family transposase | DN590_27530 | Not Available | Negative | 5431839 - 5431990 | 5389.65 |
| sgcj/ecac family oxidoreductase | DN590_27540 | Not Available | Positive | 5433192 - 5433644 | 16601.7 |
| qnr family pentapeptide repeat protein | DN590_27545 | Not Available | Negative | 5433686 - 5434212 | 19523.2 |
| is91 family transposase | DN590_27550 | Not Available | Positive | 5434622 - 5436163 | 58501.3 |
| ant(3'')-ia family aminoglycoside nucleotidyltransferase aada2 | DN590_27555 | Not Available | Negative | 5436575 - 5437366 | 29580.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

