Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | DN590_27400 | Not Available | Positive | 5412438 - 5413094 | 24420.2 |
| mercuric ion transporter mert | DN590_27405 | Not Available | Positive | 5413228 - 5413533 | 11070.1 |
| mercury resistance system periplasmic binding protein merp | DN590_27410 | Not Available | Positive | 5413549 - 5413824 | 9611.69 |
| mercury transport protein merc | DN590_27415 | Not Available | Positive | 5413852 - 5414277 | 14796.5 |
| mercury(ii) reductase | DN590_27420 | Not Available | Positive | 5414316 - 5416001 | 58770.5 |
| transcriptional regulator | DN590_27425 | Not Available | Positive | 5416019 - 5416384 | 13026.8 |
| mercury resistance protein | DN590_27430 | Not Available | Positive | 5416381 - 5416617 | 8250.31 |
| mercury resistance protein | DN590_27435 | Not Available | Negative | 5416601 - 5416720 | 4160.23 |
| duf3330 domain-containing protein | DN590_27440 | Not Available | Positive | 5416683 - 5416895 | 7375.51 |
| c4-dicarboxylate abc transporter | DN590_27445 | Not Available | Negative | 5417117 - 5418478 | 47654.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

