Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 5379790 - 5379865 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5379874 - 5379958 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5380073 - 5380147 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5380153 - 5380228 | Not Available |
| elongation factor tu | DN590_27175 | Not Available | Positive | 5380347 - 5380608 | 9470.01 |
| is630 family transposase | DN590_27180 | Not Available | Positive | 5380609 - 5380711 | 3821.72 |
| hypothetical protein | DN590_27190 | Not Available | Negative | 5380955 - 5381791 | 31160.7 |
| hypothetical protein | DN590_27195 | Not Available | Negative | 5381788 - 5382735 | 35643.3 |
| stba family protein | DN590_27200 | Not Available | Positive | 5383099 - 5384136 | 38495.5 |
| hypothetical protein | DN590_27205 | Not Available | Positive | 5384148 - 5384786 | 23641.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

