Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | DN590_27095 | Not Available | Positive | 5369035 - 5369937 | 30509.0 |
| is6 family transposase | DN590_27110 | Not Available | Negative | 5371571 - 5371645 | 2724.26 |
| cytochrome c | DN590_27115 | Not Available | Negative | 5371759 - 5372286 | 18752.9 |
| abc transporter atp-binding protein | DN590_27120 | Not Available | Negative | 5372315 - 5373025 | 25705.2 |
| abc transporter permease | DN590_27125 | Not Available | Negative | 5373027 - 5374232 | 42942.9 |
| efflux rnd transporter periplasmic adaptor subunit | DN590_27130 | Not Available | Negative | 5374229 - 5375380 | 41290.8 |
| tetr/acrr family transcriptional regulator | DN590_27135 | Not Available | Negative | 5375377 - 5375985 | 22421.2 |
| udp-n-acetylmuramate dehydrogenase | DN590_27140 | Not Available | Positive | 5376430 - 5377458 | 37751.1 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | DN590_27145 | Not Available | Positive | 5377455 - 5378417 | 35294.9 |
| type i pantothenate kinase | DN590_27150 | Not Available | Negative | 5378450 - 5379400 | 36190.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

